AI团队

王赛迪 博士/讲师

2022年毕业于美国中佛罗里达大学（University of Central Florida）计算机系，获得博士学位，研究方向包括：计算生物学，生物信息处理，数据挖掘，和 机器学习。在此之前，分别于2014年与2017年毕业于天津工业大学电子信息工程学院和同济大学软件学院，获得学士与硕士学位。目前，发表或即将发表SCI期刊论文共计10余篇，论文多发表在 GENOMICS、 Briefing in Bioinformatics、 Journal of integrative bioinformatics等领域内期刊。于2022年9月获得加州大学洛杉矶分校博后 Fellowship并在哈佛大学进行为期8个月的访问。

电子邮箱：saidiwang@henu.edu.cn

教育及工作经历：

2010/09至2014/06 天津工业大学 电子与信息工程 本科

2014/09至2017/06 同济大学 软件工程                          硕士

2017/09 至 2022/09 美国中佛罗里达大学 计算机科学       博士

2022/09 至2023/05 哈佛大学 统计系                              博后（访问）

2022/09 至2023/05 加州大学洛杉矶分校 统计系  博后

2023/11 至今  伟德国际BETVLCTOR

研究领域：

数据挖掘、机器学习、计算生物学

主要荣誉:

2017 至 2022年：美国中佛罗里达大学博士研究生全额奖学金、博士研究生研究助理奖学金

2022年 2023年：美国加州大学洛杉矶分校博后fellowship

主讲课程：

电路实验

论文：

1. Saidi Wang, Haiyan Hu, Xiaoman Li. A systematic study of motif pairs that may facilitate enhancer-promoter interactions. Journal of integrative bioinformatics. 2022 Feb 7. doi: 10.1515/jib-2021-0038. (IF = 3.321)

2. Minerva Fatimae Ventolero*, Saidi Wang*, Haiyan Hu, Xiaoman Li. Computational analyses of bacterial strains from shotgun reads. Briefings in Bioinformatics. 2022 Feb 8. doi: 10.1093/bib/bbac013. (IF= 11.622, co-first)

3. Saidi Wang*, Amlan Talukder*, Mingyu Cha, Xiaoman Li, Haiyan Hu. Computational annotation of miRNA transcription start sites, Briefings in Bioinformatics, Volume 22, Issue 1, January 2021, Pages 380–392, https://doi.org/10.1093/bib/bbz178.(IF =11.622)

4. Saidi Wang, Haiyan Hu, Xiaoman Li, Shared distal regulatory regions may contribute to the coordinated expression of human ribosomal protein genes, Genomics, Volume 112, Issue 4, 2020, Pages2886-2893, https://doi.org/10.1016/j.ygeno.2020.03.028. (IF = 3.76)

5. Saidi Wang, Zheng H, Choi JS, Lee JK, Li X, Hu H, A systematic evaluation of the computational tools for ligand-receptor-based cell-cell interaction inference. Brief Funct Genomics. 2022 Sep 16;21(5):339-356. doi: 10.1093/bfgp/elac019. PMID: 35822343; PMCID: PMC9479691. (IF = 4.241)

6. Saidi Wang, Minerva Fatimae Ventolero, Haiyan Hu, Xiaoman Li. SMS: a novel approach for bacterial strain genome reconstruction in multiple samples. (Submitted to Genomics, IF= 3.76)

7. Saidi Wang, Minerva Ventolero, Haiyan Hu, Xiaoman Li. A revisit to universal single-copy genes in bacterial genomes. Sci Rep 12, 14550 (2022). https://doi.org/10.1038/s41598-022-18762-z. (IF = 4.13)

8. Hansi Zheng*, Saidi Wang*, Xiaoman Li, Haiyan Hu. A computational modeling of the expression of primary-miRNAs. (Submitted to Nature Scientific Reports, IF = 4.13)

9. Hansi Zheng*, Saidi Wang*, Xiaoman Li, Haiyan Hu. INSISTC: Incorporating network structure information for single-cell type classification. Genomics. 2022 Sep;114(5):110480. doi: 10.1016/j.ygeno.2022.110480. Epub 2022 Sep 6. PMID: 36075505. (IF= 3.76).

10. Minerva Fatimae Ventolero*, Saidi Wang*, Haiyan Hu, Xiaoman Li. Are known bacterial strains really present? (Submitted to Nature Scientific Reports, IF = 4.13)

11. Yuxiang Zhang*, Saidi Wang*, Haiyan Hu, Xiaoman Li. A systematic study of HIF1A cofactors in hypoxic cancer cells. Sci Rep 12, 18962 (2022). https://doi.org/10.1038/s41598-022-23060-9. (IF = 4.13)

12. Saidi Wang, Hansi Zheng, Xiaoman Li, Haiyan Hu. A Computational modeling of the expression of primary-miRNAs. Poster, Annual Open House of the UCF Genomics and Bioinformatics Cluster. Apr 14^th, 2022.

科研项目：

1.   Computational Analysis of microRNA Binding, NSF (1356524）, 参与

2．A Computational Framework to Study Epigenetic Regulation, NSF (1149955), 参与

3．Computational Methods to Study Gene Transcription Initiation Patterns, NSF (1661414), 参与

4．An integrative study of distal gene regulation, NSF (2015838)， 参与

5．Bacterial haplotype reconstruction directly from next generation sequencing reads, NIH (R15GM123407)， 参与